Anwendungen zur Bioinformatik

AUGUSTUS Gensequenzanalyse

AUGUSTUS is a program that predicts genes in eukaryotic genomic sequences. Currently, it has been trained to predict genes in human, Drosophila melagonaster, Arabidopsis thaliana, Brugia malayi, Aedes aegypti, Coprinus cinereus, Tribolium castaneum, Schistosoma mansoni, Tetrahymena thermophila, Galdieria sulphuraria and Zea mays. In addition the species parameters of the following species are a courtesy of Jason Stajich: Caenorhabditis elegans, Saccharomyces cerevisiae, Ustilago maydis, Phanerochaete chrysosporium, Neurospora crass, Histoplasma capsulatum, Fusarium graminearium, Cryptococcus neoformans, Aspergillus nidulans.

Zur Anwendung im MediGRID Applikationsportal

A SNP Selection Portlet

Single nucleotide polymorphisms (SNPs) provide an important tool in pinpointing susceptibility genes for complex diseases and in unveiling human molecular evolution. Selection and retrieval of an optimal SNP set from publicly available databases have emerged as the foremost bottlenecks in designing large-scale linkage disequilibrium studies, particularly in case-control settings.

Zur Anwendung im MediGRID Applikationsportal